What is UniProt database?
The Universal Protein Resource (UniProt) is a comprehensive resource for protein sequence and annotation data. The UniProt databases are the UniProt Knowledgebase (UniProtKB), the UniProt Reference Clusters (UniRef), and the UniProt Archive (UniParc).
What type of knowledge database is UniProt?
The UniProt Knowledgebase (UniProtKB) is the central hub for the collection of functional information on proteins, with accurate, consistent and rich annotation.
What is UniParc database?
The UniProt Archive (UniParc) is a comprehensive and non-redundant database that contains most of the publicly available protein sequences in the world. Proteins may exist in different source databases and in multiple copies in the same database.
Which protein is used in database?
The Protein database is a collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB. Protein sequences are the fundamental determinants of biological structure and function.
Is UniProt and Swiss Prot same?
Swiss-Prot (created in 1986) is a high quality manually annotated and non-redundant protein sequence database, which brings together experimental results, computed features and scientific conclusions. UniProtKB/Swiss-Prot is now the reviewed section of the UniProt Knowledgebase.
What is PDB used for?
The PDB distributes coordinate data, structure factor files and NMR constraint files. In addition it provides documentation and derived data. The coordinate data are distributed in PDB and mmCIF formats.
Who created Swiss Prot?
SWISS-PROT (1) is an annotated protein sequence database, which was created at the Department of Medical Biochemistry of the University of Geneva and has been a collaborative effort of the Department and the European Molecular Biology Laboratory (EMBL), since 1987.
Who created SWISS-PROT database?
What is PDB in database?
A pluggable database (PDB) is a portable collection of schemas, schema objects, and nonschema objects that appears to an Oracle Net client as a non-CDB. PDBs can be plugged into to CDBs. A CDB can contain multiple PDBs. Each PDB appears on the network as a separate database.
Is PDB a primary database?
All the data collected from depositors by the PDB are considered primary data. Primary data contain, in addition to the coordinates, general information required for all deposited structures and information specific to the method of structure determination.
What is PDB and CDB database?
A CDB includes zero, one, or many customer-created pluggable databases (PDBs). A PDB is a portable collection of schemas, schema objects, and non-schema objects that appears to an Oracle Net client as a non-CDB . All Oracle databases before Oracle Database 12c were non-CDBs.